- Atrophy (H&E; ATPase):
Also see Fiber type disorders
- Muscle fiber damage
- Nuclear pathology (H&E)
- Inflammation (H&E; Congo red; Acid phosphatase; Esterase; Immunocytochemistry)
- Endomysial fibrosis (H&E; GT & VvG)
- Diffuse & abundant:
Dystrophy or endstage muscle
- Patchy: Acquired myopathy
- Increased endomysial connective tissue between muscle fibers is normal in regions with NMJs
- Abnormal internal fiber architecture (NADH stain)
- Targets:
Denervation & reinnervation; Tenotomy
- Cores: Central core syndromes
- Coarse: Immature or regenerating fibers
- Rods (GT stain): Rod myopathy; Reinnervation with targets
- Tubular aggregates
- Moth-eaten fibers: Systemic connective tissue disorders; Chronic dystrophy
- Rings
- Fiber type disorders (ATPases pH 9.4, 4.6 & 4.3)
- Mitochondrial (SDH & Cytochrome oxidase)
- Glycogen storage (PAS)
- Lipid storage (Sudan black or Oil red O)
- Carnitine deficiency
- Malnutrition
- Vacuoles
- Amyloid (Congo red)